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Cluster: Rep_958_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_958_c_108 Rep_958_c_108_8 5986 6975 + 3.A.1.2.2
TC Rep_958_c_108 Rep_958_c_108_9 7049 8563 + 3.A.1.2.2
TC Rep_958_c_108 Rep_958_c_108_10 8578 9564 + 3.A.1.2.2
pfam Rep_958_c_108 Rep_958_c_108_11 9728 10531 + Trehalose_PPase
CAZyme Rep_958_c_108 Rep_958_c_108_12 10506 11930 + GT20
Gene ID: Rep_958_c_108_8
Type: TC
Location: 5986 - 6975 (+)
Gene ID: Rep_958_c_108_9
Type: TC
Location: 7049 - 8563 (+)
Gene ID: Rep_958_c_108_10
Type: TC
Location: 8578 - 9564 (+)
Gene ID: Rep_958_c_108_11
Type: pfam
Location: 9728 - 10531 (+)
Gene ID: Rep_958_c_108_12
Type: CAZyme
Location: 10506 - 11930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_958_c_108_11 omnivore > vegetarian 1.29056 0.04829

🧭 Explore Read Mapping of CGC

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