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Cluster: Rep_958_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_958_c_103 Rep_958_c_103_38 45357 46583 - CE4
pfam Rep_958_c_103 Rep_958_c_103_39 46640 47080 - EIIA-man
TC Rep_958_c_103 Rep_958_c_103_40 47185 47955 - 3.A.1.105.17
TC Rep_958_c_103 Rep_958_c_103_41 47952 48878 - 3.A.1.105.17
TC Rep_958_c_103 Rep_958_c_103_42 48987 49649 + 2.A.53.3.8
STP Rep_958_c_103 Rep_958_c_103_43 49690 50226 - Pribosyltran
pfam Rep_958_c_103 Rep_958_c_103_44 50432 52822 + PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2
CAZyme Rep_958_c_103 Rep_958_c_103_45 53003 54553 - AA1
TC Rep_958_c_103 Rep_958_c_103_46 54718 55065 + 8.A.2.1.3
Gene ID: Rep_958_c_103_38
Type: CAZyme
Location: 45357 - 46583 (-)
Gene ID: Rep_958_c_103_39
Type: pfam
Location: 46640 - 47080 (-)
Gene ID: Rep_958_c_103_40
Type: TC
Location: 47185 - 47955 (-)
Gene ID: Rep_958_c_103_41
Type: TC
Location: 47952 - 48878 (-)
Gene ID: Rep_958_c_103_42
Type: TC
Location: 48987 - 49649 (+)
Gene ID: Rep_958_c_103_43
Type: STP
Location: 49690 - 50226 (-)
Gene ID: Rep_958_c_103_44
Type: pfam
Location: 50432 - 52822 (+)
Gene ID: Rep_958_c_103_45
Type: CAZyme
Location: 53003 - 54553 (-)
Gene ID: Rep_958_c_103_46
Type: TC
Location: 54718 - 55065 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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