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Cluster: Rep_958_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_958_c_98 Rep_958_c_98_5 3763 5103 + 2.A.8.1.8
TC Rep_958_c_98 Rep_958_c_98_6 5160 5753 - 2.A.95.1.5
pfam Rep_958_c_98 Rep_958_c_98_7 5946 7049 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme Rep_958_c_98 Rep_958_c_98_8 7321 9504 + CBM48 | GH13_9
CAZyme Rep_958_c_98 Rep_958_c_98_9 9504 11477 + CBM48 | GH13_11
pfam Rep_958_c_98 Rep_958_c_98_10 11495 12790 + NTP_transferase | Hexapep_GlmU
CAZyme Rep_958_c_98 Rep_958_c_98_11 12790 14223 + GT5
CAZyme Rep_958_c_98 Rep_958_c_98_12 14242 16689 + GT35
Gene ID: Rep_958_c_98_5
Type: TC
Location: 3763 - 5103 (+)
Gene ID: Rep_958_c_98_6
Type: TC
Location: 5160 - 5753 (-)
Gene ID: Rep_958_c_98_7
Type: pfam
Location: 5946 - 7049 (+)
Gene ID: Rep_958_c_98_8
Type: CAZyme
Location: 7321 - 9504 (+)
Gene ID: Rep_958_c_98_9
Type: CAZyme
Location: 9504 - 11477 (+)
Gene ID: Rep_958_c_98_10
Type: pfam
Location: 11495 - 12790 (+)
Gene ID: Rep_958_c_98_11
Type: CAZyme
Location: 12790 - 14223 (+)
Gene ID: Rep_958_c_98_12
Type: CAZyme
Location: 14242 - 16689 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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