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Cluster: Rep_958_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_958_c_92 Rep_958_c_92_50 47891 49156 - 1.B.25.1.5
TC Rep_958_c_92 Rep_958_c_92_51 49195 50568 - 2.A.2.3.1
CAZyme Rep_958_c_92 Rep_958_c_92_52 50565 52376 - GH2
Gene ID: Rep_958_c_92_50
Type: TC
Location: 47891 - 49156 (-)
Gene ID: Rep_958_c_92_51
Type: TC
Location: 49195 - 50568 (-)
Gene ID: Rep_958_c_92_52
Type: CAZyme
Location: 50565 - 52376 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_958_c_92_51 omnivore > vegetarian 1.53841 0.04829

🧭 Explore Read Mapping of CGC

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