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Cluster: Rep_958_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_958_c_89 Rep_958_c_89_27 28706 30448 - 2.A.36.6.11
peptidase Rep_958_c_89 Rep_958_c_89_28 30543 31457 - S66.002
CAZyme Rep_958_c_89 Rep_958_c_89_29 31557 32168 + GH23
pfam Rep_958_c_89 Rep_958_c_89_30 32170 32904 - PilZ | PilZN
TC Rep_958_c_89 Rep_958_c_89_31 33105 33359 + 1.E.43.1.1
CAZyme Rep_958_c_89 Rep_958_c_89_32 33499 35190 - GH37
TC Rep_958_c_89 Rep_958_c_89_33 35521 36876 + 2.A.2.3.4
TC Rep_958_c_89 Rep_958_c_89_34 36929 38347 - 4.A.2.1.17
Gene ID: Rep_958_c_89_27
Type: TC
Location: 28706 - 30448 (-)
Gene ID: Rep_958_c_89_28
Type: peptidase
Location: 30543 - 31457 (-)
Gene ID: Rep_958_c_89_29
Type: CAZyme
Location: 31557 - 32168 (+)
Gene ID: Rep_958_c_89_30
Type: pfam
Location: 32170 - 32904 (-)
Gene ID: Rep_958_c_89_31
Type: TC
Location: 33105 - 33359 (+)
Gene ID: Rep_958_c_89_32
Type: CAZyme
Location: 33499 - 35190 (-)
Gene ID: Rep_958_c_89_33
Type: TC
Location: 35521 - 36876 (+)
Gene ID: Rep_958_c_89_34
Type: TC
Location: 36929 - 38347 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_958_c_89_28 omnivore > vegetarian 1.14452 0.04829

🧭 Explore Read Mapping of CGC

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