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Cluster: Rep_958_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_958_c_75 Rep_958_c_75_1 29 3166 - 2.A.6.1.4
TC Rep_958_c_75 Rep_958_c_75_2 3178 4401 - 2.A.6.1.4
TC Rep_958_c_75 Rep_958_c_75_3 4417 4749 - 2.A.6.1.4
TC Rep_958_c_75 Rep_958_c_75_4 4779 6155 - 1.B.17.3.5
TF Rep_958_c_75 Rep_958_c_75_5 6312 6995 + Trans_reg_C
TC Rep_958_c_75 Rep_958_c_75_6 6985 8427 + 2.A.21.9.1
CAZyme Rep_958_c_75 Rep_958_c_75_7 8577 10814 + GT2
Gene ID: Rep_958_c_75_1
Type: TC
Location: 29 - 3166 (-)
Gene ID: Rep_958_c_75_2
Type: TC
Location: 3178 - 4401 (-)
Gene ID: Rep_958_c_75_3
Type: TC
Location: 4417 - 4749 (-)
Gene ID: Rep_958_c_75_4
Type: TC
Location: 4779 - 6155 (-)
Gene ID: Rep_958_c_75_5
Type: TF
Location: 6312 - 6995 (+)
Gene ID: Rep_958_c_75_6
Type: TC
Location: 6985 - 8427 (+)
Gene ID: Rep_958_c_75_7
Type: CAZyme
Location: 8577 - 10814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_958_c_75_5 omnivore > vegetarian 1.30541 0.04829
Rep_958_c_75_6 omnivore > vegetarian 1.27800 0.04762

🧭 Explore Read Mapping of CGC

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