dbCAN Logo

Cluster: Rep_958_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_958_c_55 Rep_958_c_55_23 26027 27460 - GH1
pfam Rep_958_c_55 Rep_958_c_55_24 27505 27816 + ASCH
TC Rep_958_c_55 Rep_958_c_55_25 27980 28639 + 1.C.113.1.10
Gene ID: Rep_958_c_55_23
Type: CAZyme
Location: 26027 - 27460 (-)
Gene ID: Rep_958_c_55_24
Type: pfam
Location: 27505 - 27816 (+)
Gene ID: Rep_958_c_55_25
Type: TC
Location: 27980 - 28639 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_958_c_55_24 omnivore > vegetarian 1.97266 0.03416

🧭 Explore Read Mapping of CGC

← Back to Cluster List