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Cluster: Rep_954_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_954_c_1 Rep_954_c_1_151 167409 168737 - GT2
CAZyme Rep_954_c_1 Rep_954_c_1_152 168730 170748 - CE4 | GH153
TC Rep_954_c_1 Rep_954_c_1_153 170758 173214 - 1.B.55.1.1
STP Rep_954_c_1 Rep_954_c_1_154 174311 176305 + EAL | GGDEF
TC Rep_954_c_1 Rep_954_c_1_155 176482 177768 + 2.A.23.1.7
peptidase Rep_954_c_1 Rep_954_c_1_156 177967 179442 + M16.UNW
TC Rep_954_c_1 Rep_954_c_1_157 179483 181543 - 9.B.121.1.1
Gene ID: Rep_954_c_1_151
Type: CAZyme
Location: 167409 - 168737 (-)
Gene ID: Rep_954_c_1_152
Type: CAZyme
Location: 168730 - 170748 (-)
Gene ID: Rep_954_c_1_153
Type: TC
Location: 170758 - 173214 (-)
Gene ID: Rep_954_c_1_154
Type: STP
Location: 174311 - 176305 (+)
Gene ID: Rep_954_c_1_155
Type: TC
Location: 176482 - 177768 (+)
Gene ID: Rep_954_c_1_156
Type: peptidase
Location: 177967 - 179442 (+)
Gene ID: Rep_954_c_1_157
Type: TC
Location: 179483 - 181543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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