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Cluster: Rep_954_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_954_c_1 Rep_954_c_1_87 85931 86419 + 5.A.3.11.1
STP Rep_954_c_1 Rep_954_c_1_88 86424 87680 - Aminotran_1_2
CAZyme Rep_954_c_1 Rep_954_c_1_89 87815 89851 - GH13_19
CAZyme Rep_954_c_1 Rep_954_c_1_90 90164 90988 + GH73
TF Rep_954_c_1 Rep_954_c_1_91 91064 92317 - HTH_AraC | HTH_AraC
TC Rep_954_c_1 Rep_954_c_1_92 92339 93520 - 3.A.1.2.4
TC Rep_954_c_1 Rep_954_c_1_93 93498 95039 - 3.A.1.2.4
TC Rep_954_c_1 Rep_954_c_1_94 95108 96100 - 3.A.1.2.4
Gene ID: Rep_954_c_1_87
Type: TC
Location: 85931 - 86419 (+)
Gene ID: Rep_954_c_1_88
Type: STP
Location: 86424 - 87680 (-)
Gene ID: Rep_954_c_1_89
Type: CAZyme
Location: 87815 - 89851 (-)
Gene ID: Rep_954_c_1_90
Type: CAZyme
Location: 90164 - 90988 (+)
Gene ID: Rep_954_c_1_91
Type: TF
Location: 91064 - 92317 (-)
Gene ID: Rep_954_c_1_92
Type: TC
Location: 92339 - 93520 (-)
Gene ID: Rep_954_c_1_93
Type: TC
Location: 93498 - 95039 (-)
Gene ID: Rep_954_c_1_94
Type: TC
Location: 95108 - 96100 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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