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Cluster: Rep_954_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_954_c_49 Rep_954_c_49_1 146 2050 - GH37
TC Rep_954_c_49 Rep_954_c_49_2 2234 3004 - 3.A.1.17.2
pfam Rep_954_c_49 Rep_954_c_49_3 3013 3972 - OpuAC | NMT1 | Phosphonate-bd | NMT1_2
TC Rep_954_c_49 Rep_954_c_49_4 4022 4861 - 3.A.1.17.2
sulfatase Rep_954_c_49 Rep_954_c_49_5 4872 6218 - S2
TC Rep_954_c_49 Rep_954_c_49_6 6529 8463 + 2.A.108.2.10
TC Rep_954_c_49 Rep_954_c_49_7 8497 9024 + 2.A.108.2.10
pfam Rep_954_c_49 Rep_954_c_49_8 9157 10530 + YHS | FtrD-like
TC Rep_954_c_49 Rep_954_c_49_9 10533 11816 + 3.A.1.122.8
pfam Rep_954_c_49 Rep_954_c_49_10 11806 12936 + FtsX | MacB_PCD
TC Rep_954_c_49 Rep_954_c_49_11 12941 13633 + 3.A.1.122.8
Gene ID: Rep_954_c_49_1
Type: CAZyme
Location: 146 - 2050 (-)
Gene ID: Rep_954_c_49_2
Type: TC
Location: 2234 - 3004 (-)
Gene ID: Rep_954_c_49_3
Type: pfam
Location: 3013 - 3972 (-)
Gene ID: Rep_954_c_49_4
Type: TC
Location: 4022 - 4861 (-)
Gene ID: Rep_954_c_49_5
Type: sulfatase
Location: 4872 - 6218 (-)
Gene ID: Rep_954_c_49_6
Type: TC
Location: 6529 - 8463 (+)
Gene ID: Rep_954_c_49_7
Type: TC
Location: 8497 - 9024 (+)
Gene ID: Rep_954_c_49_8
Type: pfam
Location: 9157 - 10530 (+)
Gene ID: Rep_954_c_49_9
Type: TC
Location: 10533 - 11816 (+)
Gene ID: Rep_954_c_49_10
Type: pfam
Location: 11806 - 12936 (+)
Gene ID: Rep_954_c_49_11
Type: TC
Location: 12941 - 13633 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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