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Cluster: Rep_954_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_954_c_19 Rep_954_c_19_55 59748 61055 + CE8
pfam Rep_954_c_19 Rep_954_c_19_56 61128 62123 - Lactonase
pfam Rep_954_c_19 Rep_954_c_19_57 62277 63095 + Hydrolase | S6PP | Hydrolase_3
TC Rep_954_c_19 Rep_954_c_19_58 63096 64154 - 3.A.1.8.1
TC Rep_954_c_19 Rep_954_c_19_59 64157 64846 - 3.A.1.8.1
TC Rep_954_c_19 Rep_954_c_19_60 64846 65619 - 3.A.1.8.1
TC Rep_954_c_19 Rep_954_c_19_61 65749 65898 - 2.A.6.2.49
TF Rep_954_c_19 Rep_954_c_19_62 66024 66815 + HTH_1
TC Rep_954_c_19 Rep_954_c_19_63 66893 68365 + 3.A.1.15.8
Gene ID: Rep_954_c_19_55
Type: CAZyme
Location: 59748 - 61055 (+)
Gene ID: Rep_954_c_19_56
Type: pfam
Location: 61128 - 62123 (-)
Gene ID: Rep_954_c_19_57
Type: pfam
Location: 62277 - 63095 (+)
Gene ID: Rep_954_c_19_58
Type: TC
Location: 63096 - 64154 (-)
Gene ID: Rep_954_c_19_59
Type: TC
Location: 64157 - 64846 (-)
Gene ID: Rep_954_c_19_60
Type: TC
Location: 64846 - 65619 (-)
Gene ID: Rep_954_c_19_61
Type: TC
Location: 65749 - 65898 (-)
Gene ID: Rep_954_c_19_62
Type: TF
Location: 66024 - 66815 (+)
Gene ID: Rep_954_c_19_63
Type: TC
Location: 66893 - 68365 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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