dbCAN Logo

Cluster: Rep_954_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_954_c_15 Rep_954_c_15_42 39340 40797 + 4.A.1.2.3
CAZyme Rep_954_c_15 Rep_954_c_15_43 40816 42246 + GH1
pfam Rep_954_c_15 Rep_954_c_15_44 42512 43483 + PTE
pfam Rep_954_c_15 Rep_954_c_15_45 43492 44223 + Creatininase
TC Rep_954_c_15 Rep_954_c_15_46 44220 44654 + 4.A.7.1.1
pfam Rep_954_c_15 Rep_954_c_15_47 44683 44961 + PTS_IIB
TC Rep_954_c_15 Rep_954_c_15_48 44966 46276 + 4.A.7.1.4
STP Rep_954_c_15 Rep_954_c_15_49 46288 47028 + SIS
TF Rep_954_c_15 Rep_954_c_15_50 47042 47794 + GntR
TC Rep_954_c_15 Rep_954_c_15_51 48039 50423 + 5.A.3.3.2
TC Rep_954_c_15 Rep_954_c_15_52 50420 51040 + 5.A.3.3.1
Gene ID: Rep_954_c_15_42
Type: TC
Location: 39340 - 40797 (+)
Gene ID: Rep_954_c_15_43
Type: CAZyme
Location: 40816 - 42246 (+)
Gene ID: Rep_954_c_15_44
Type: pfam
Location: 42512 - 43483 (+)
Gene ID: Rep_954_c_15_45
Type: pfam
Location: 43492 - 44223 (+)
Gene ID: Rep_954_c_15_46
Type: TC
Location: 44220 - 44654 (+)
Gene ID: Rep_954_c_15_47
Type: pfam
Location: 44683 - 44961 (+)
Gene ID: Rep_954_c_15_48
Type: TC
Location: 44966 - 46276 (+)
Gene ID: Rep_954_c_15_49
Type: STP
Location: 46288 - 47028 (+)
Gene ID: Rep_954_c_15_50
Type: TF
Location: 47042 - 47794 (+)
Gene ID: Rep_954_c_15_51
Type: TC
Location: 48039 - 50423 (+)
Gene ID: Rep_954_c_15_52
Type: TC
Location: 50420 - 51040 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List