dbCAN Logo

Cluster: Rep_954_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_954_c_11 Rep_954_c_11_8 5906 7150 + 2.A.1.10.4
pfam Rep_954_c_11 Rep_954_c_11_9 7143 8231 + GFO_IDH_MocA | NAD_binding_3 | GFO_IDH_MocA_C3
pfam Rep_954_c_11 Rep_954_c_11_10 8228 9292 + AP_endonuc_2
CAZyme Rep_954_c_11 Rep_954_c_11_11 9289 10410 + GH177
pfam Rep_954_c_11 Rep_954_c_11_12 10463 11644 - Lipase_GDSL | Lipase_GDSL_2 | Ape1_N
pfam Rep_954_c_11 Rep_954_c_11_13 11631 12659 - DUF459 | Lipase_GDSL_2
TC Rep_954_c_11 Rep_954_c_11_14 12646 14016 - 2.A.50.2.1
Gene ID: Rep_954_c_11_8
Type: TC
Location: 5906 - 7150 (+)
Gene ID: Rep_954_c_11_9
Type: pfam
Location: 7143 - 8231 (+)
Gene ID: Rep_954_c_11_10
Type: pfam
Location: 8228 - 9292 (+)
Gene ID: Rep_954_c_11_11
Type: CAZyme
Location: 9289 - 10410 (+)
Gene ID: Rep_954_c_11_12
Type: pfam
Location: 10463 - 11644 (-)
Gene ID: Rep_954_c_11_13
Type: pfam
Location: 11631 - 12659 (-)
Gene ID: Rep_954_c_11_14
Type: TC
Location: 12646 - 14016 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List