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Cluster: Rep_954_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_954_c_8 Rep_954_c_8_61 64123 66642 + GT51
TC Rep_954_c_8 Rep_954_c_8_62 66962 69217 + 1.B.14.1.2
TC Rep_954_c_8 Rep_954_c_8_63 69265 70062 + 3.A.1.14.3
TC Rep_954_c_8 Rep_954_c_8_64 70062 70958 + 3.A.1.14.3
TC Rep_954_c_8 Rep_954_c_8_65 70955 72940 + 3.A.1.14.3
TF Rep_954_c_8 Rep_954_c_8_66 72972 73874 - HTH_1
TC Rep_954_c_8 Rep_954_c_8_67 73961 74740 + 2.A.37.1.1
pfam Rep_954_c_8 Rep_954_c_8_68 74783 76063 - Aminotran_3
TC Rep_954_c_8 Rep_954_c_8_69 76240 77652 + 2.A.49.5.5
pfam Rep_954_c_8 Rep_954_c_8_70 77786 78130 + Fe-S_biosyn
TC Rep_954_c_8 Rep_954_c_8_71 78181 78801 - 1.A.62.2.2
TC Rep_954_c_8 Rep_954_c_8_72 78811 79617 - 3.A.1.13.1
Gene ID: Rep_954_c_8_61
Type: CAZyme
Location: 64123 - 66642 (+)
Gene ID: Rep_954_c_8_62
Type: TC
Location: 66962 - 69217 (+)
Gene ID: Rep_954_c_8_63
Type: TC
Location: 69265 - 70062 (+)
Gene ID: Rep_954_c_8_64
Type: TC
Location: 70062 - 70958 (+)
Gene ID: Rep_954_c_8_65
Type: TC
Location: 70955 - 72940 (+)
Gene ID: Rep_954_c_8_66
Type: TF
Location: 72972 - 73874 (-)
Gene ID: Rep_954_c_8_67
Type: TC
Location: 73961 - 74740 (+)
Gene ID: Rep_954_c_8_68
Type: pfam
Location: 74783 - 76063 (-)
Gene ID: Rep_954_c_8_69
Type: TC
Location: 76240 - 77652 (+)
Gene ID: Rep_954_c_8_70
Type: pfam
Location: 77786 - 78130 (+)
Gene ID: Rep_954_c_8_71
Type: TC
Location: 78181 - 78801 (-)
Gene ID: Rep_954_c_8_72
Type: TC
Location: 78811 - 79617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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