Cluster: Rep_954_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_954
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_954_c_7 | Rep_954_c_7_90 | 101944 | 102609 | + | GH19 |
| NULL(UNKNOWN) | Rep_954_c_7 | Rep_954_c_7_91 | 102606 | 102824 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_954_c_7 | Rep_954_c_7_92 | 102969 | 103847 | - | 8.A.5.1.7 |
| STP | Rep_954_c_7 | Rep_954_c_7_93 | 104018 | 104623 | + | TetR_N |
| TC | Rep_954_c_7 | Rep_954_c_7_94 | 104760 | 104933 | - | 9.B.209.1.1 |
Gene ID: Rep_954_c_7_90
Type: CAZyme
Location: 101944 - 102609 (+)
Type: CAZyme
Location: 101944 - 102609 (+)
Gene ID: Rep_954_c_7_91
Type:
Location: 102606 - 102824 (+)
Type:
Location: 102606 - 102824 (+)
Gene ID: Rep_954_c_7_92
Type: TC
Location: 102969 - 103847 (-)
Type: TC
Location: 102969 - 103847 (-)
Gene ID: Rep_954_c_7_93
Type: STP
Location: 104018 - 104623 (+)
Type: STP
Location: 104018 - 104623 (+)
Gene ID: Rep_954_c_7_94
Type: TC
Location: 104760 - 104933 (-)
Type: TC
Location: 104760 - 104933 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Atlantibacter
Species
Atlantibacter hermannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.