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Cluster: Rep_953_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_953_c_13 Rep_953_c_13_35 35092 37434 - 3.A.3.6.2
pfam Rep_953_c_13 Rep_953_c_13_36 37714 38409 + Pirin | Pirin_C_2
CAZyme Rep_953_c_13 Rep_953_c_13_37 38713 40092 + GH1
TF Rep_953_c_13 Rep_953_c_13_38 40126 41232 + LacI
STP Rep_953_c_13 Rep_953_c_13_39 41420 41959 + SKI
TC Rep_953_c_13 Rep_953_c_13_40 41959 43296 + 2.A.8.1.8
pfam Rep_953_c_13 Rep_953_c_13_41 43684 44760 + DUF3142
NULL(UNKNOWN) Rep_953_c_13 Rep_953_c_13_42 44747 46897 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_953_c_13 Rep_953_c_13_43 46980 47603 - 2.A.76.1.2
Gene ID: Rep_953_c_13_35
Type: TC
Location: 35092 - 37434 (-)
Gene ID: Rep_953_c_13_36
Type: pfam
Location: 37714 - 38409 (+)
Gene ID: Rep_953_c_13_37
Type: CAZyme
Location: 38713 - 40092 (+)
Gene ID: Rep_953_c_13_38
Type: TF
Location: 40126 - 41232 (+)
Gene ID: Rep_953_c_13_39
Type: STP
Location: 41420 - 41959 (+)
Gene ID: Rep_953_c_13_40
Type: TC
Location: 41959 - 43296 (+)
Gene ID: Rep_953_c_13_41
Type: pfam
Location: 43684 - 44760 (+)
Gene ID: Rep_953_c_13_42
Type:
Location: 44747 - 46897 (+)
Gene ID: Rep_953_c_13_43
Type: TC
Location: 46980 - 47603 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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