dbCAN Logo

Cluster: Rep_953_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_953_c_11 Rep_953_c_11_90 90255 91610 - 1.B.15.1.1
CAZyme Rep_953_c_11 Rep_953_c_11_91 91690 93117 - GH32
TC Rep_953_c_11 Rep_953_c_11_92 93138 94379 - 2.A.1.5.2
TF Rep_953_c_11 Rep_953_c_11_93 94811 95806 + LacI
TC Rep_953_c_11 Rep_953_c_11_94 96556 98022 + 2.A.3.2.7
pfam Rep_953_c_11 Rep_953_c_11_95 98129 100501 + OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C
TC Rep_953_c_11 Rep_953_c_11_96 100575 102086 + 2.A.3.2.7
TC Rep_953_c_11 Rep_953_c_11_97 102523 103173 + 3.A.1.15.3
Gene ID: Rep_953_c_11_90
Type: TC
Location: 90255 - 91610 (-)
Gene ID: Rep_953_c_11_91
Type: CAZyme
Location: 91690 - 93117 (-)
Gene ID: Rep_953_c_11_92
Type: TC
Location: 93138 - 94379 (-)
Gene ID: Rep_953_c_11_93
Type: TF
Location: 94811 - 95806 (+)
Gene ID: Rep_953_c_11_94
Type: TC
Location: 96556 - 98022 (+)
Gene ID: Rep_953_c_11_95
Type: pfam
Location: 98129 - 100501 (+)
Gene ID: Rep_953_c_11_96
Type: TC
Location: 100575 - 102086 (+)
Gene ID: Rep_953_c_11_97
Type: TC
Location: 102523 - 103173 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List