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Cluster: Rep_953_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_953_c_8 Rep_953_c_8_29 26932 27990 - 1.B.52.2.1
pfam Rep_953_c_8 Rep_953_c_8_30 28305 28553 + DUF1480
peptidase Rep_953_c_8 Rep_953_c_8_31 28661 30574 - X52.001
TC Rep_953_c_8 Rep_953_c_8_32 30794 31183 - 9.B.124.1.2
TC Rep_953_c_8 Rep_953_c_8_33 31478 33073 + 3.A.1.5.3
TC Rep_953_c_8 Rep_953_c_8_34 33064 34083 + 3.A.1.5.11
TC Rep_953_c_8 Rep_953_c_8_35 34080 34889 + 3.A.1.5.20
TC Rep_953_c_8 Rep_953_c_8_36 34889 35707 + 3.A.1.5.23
TC Rep_953_c_8 Rep_953_c_8_37 35707 36297 + 3.A.1.5.3
STP Rep_953_c_8 Rep_953_c_8_38 36354 37493 - Peripla_BP_2
TC Rep_953_c_8 Rep_953_c_8_39 37676 38959 - 2.A.42.2.1
CAZyme Rep_953_c_8 Rep_953_c_8_40 39676 40326 - GH23
Gene ID: Rep_953_c_8_29
Type: TC
Location: 26932 - 27990 (-)
Gene ID: Rep_953_c_8_30
Type: pfam
Location: 28305 - 28553 (+)
Gene ID: Rep_953_c_8_31
Type: peptidase
Location: 28661 - 30574 (-)
Gene ID: Rep_953_c_8_32
Type: TC
Location: 30794 - 31183 (-)
Gene ID: Rep_953_c_8_33
Type: TC
Location: 31478 - 33073 (+)
Gene ID: Rep_953_c_8_34
Type: TC
Location: 33064 - 34083 (+)
Gene ID: Rep_953_c_8_35
Type: TC
Location: 34080 - 34889 (+)
Gene ID: Rep_953_c_8_36
Type: TC
Location: 34889 - 35707 (+)
Gene ID: Rep_953_c_8_37
Type: TC
Location: 35707 - 36297 (+)
Gene ID: Rep_953_c_8_38
Type: STP
Location: 36354 - 37493 (-)
Gene ID: Rep_953_c_8_39
Type: TC
Location: 37676 - 38959 (-)
Gene ID: Rep_953_c_8_40
Type: CAZyme
Location: 39676 - 40326 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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