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Cluster: Rep_953_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_953_c_5 Rep_953_c_5_139 152765 155752 - 9.B.34.1.1
TC Rep_953_c_5 Rep_953_c_5_140 155981 157417 - 1.A.26.1.2
pfam Rep_953_c_5 Rep_953_c_5_141 157500 157724 - DUF2633
STP Rep_953_c_5 Rep_953_c_5_142 158269 160473 + EAL | MASE1
TC Rep_953_c_5 Rep_953_c_5_143 161115 162434 + 2.A.26.1.10
TC Rep_953_c_5 Rep_953_c_5_144 162580 163974 + 2.A.3.1.6
NULL(UNKNOWN) Rep_953_c_5 Rep_953_c_5_145 164063 164305 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_953_c_5 Rep_953_c_5_146 164508 165758 - 1.A.23.4.5
CAZyme Rep_953_c_5 Rep_953_c_5_147 165976 167805 + CBM34 | GH13_21
Gene ID: Rep_953_c_5_139
Type: TC
Location: 152765 - 155752 (-)
Gene ID: Rep_953_c_5_140
Type: TC
Location: 155981 - 157417 (-)
Gene ID: Rep_953_c_5_141
Type: pfam
Location: 157500 - 157724 (-)
Gene ID: Rep_953_c_5_142
Type: STP
Location: 158269 - 160473 (+)
Gene ID: Rep_953_c_5_143
Type: TC
Location: 161115 - 162434 (+)
Gene ID: Rep_953_c_5_144
Type: TC
Location: 162580 - 163974 (+)
Gene ID: Rep_953_c_5_145
Type:
Location: 164063 - 164305 (-)
Gene ID: Rep_953_c_5_146
Type: TC
Location: 164508 - 165758 (-)
Gene ID: Rep_953_c_5_147
Type: CAZyme
Location: 165976 - 167805 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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