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Cluster: Rep_953_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_953_c_5 Rep_953_c_5_94 108781 110070 + 3.A.4.1.1
pfam Rep_953_c_5 Rep_953_c_5_95 110083 110508 + ArsC
pfam Rep_953_c_5 Rep_953_c_5_96 110638 111657 + ADH_zinc_N | AlaDh_PNT_C | ADH_N | ADH_zinc_N_2
TC Rep_953_c_5 Rep_953_c_5_97 111713 112900 - 2.A.1.7.11
TF Rep_953_c_5 Rep_953_c_5_98 113000 113713 + HTH_6
CAZyme Rep_953_c_5 Rep_953_c_5_99 113757 115136 - GH4
TC Rep_953_c_5 Rep_953_c_5_100 115150 116721 - 4.A.1.1.8
TC Rep_953_c_5 Rep_953_c_5_101 116999 117325 + 2.A.7.26.1
TC Rep_953_c_5 Rep_953_c_5_102 117394 119658 - 1.B.14.7.1
peptidase Rep_953_c_5 Rep_953_c_5_103 119712 121853 - S09.UPA
TC Rep_953_c_5 Rep_953_c_5_104 121947 122729 - 2.C.1.1.3
pfam Rep_953_c_5 Rep_953_c_5_105 122740 123621 - Cofac_haem_bdg
TC Rep_953_c_5 Rep_953_c_5_106 123699 124133 - 1.A.30.2.1
TC Rep_953_c_5 Rep_953_c_5_107 124138 125004 - 1.A.30.2.1
TC Rep_953_c_5 Rep_953_c_5_108 125481 126392 + 2.A.7.17.1
Gene ID: Rep_953_c_5_94
Type: TC
Location: 108781 - 110070 (+)
Gene ID: Rep_953_c_5_95
Type: pfam
Location: 110083 - 110508 (+)
Gene ID: Rep_953_c_5_96
Type: pfam
Location: 110638 - 111657 (+)
Gene ID: Rep_953_c_5_97
Type: TC
Location: 111713 - 112900 (-)
Gene ID: Rep_953_c_5_98
Type: TF
Location: 113000 - 113713 (+)
Gene ID: Rep_953_c_5_99
Type: CAZyme
Location: 113757 - 115136 (-)
Gene ID: Rep_953_c_5_100
Type: TC
Location: 115150 - 116721 (-)
Gene ID: Rep_953_c_5_101
Type: TC
Location: 116999 - 117325 (+)
Gene ID: Rep_953_c_5_102
Type: TC
Location: 117394 - 119658 (-)
Gene ID: Rep_953_c_5_103
Type: peptidase
Location: 119712 - 121853 (-)
Gene ID: Rep_953_c_5_104
Type: TC
Location: 121947 - 122729 (-)
Gene ID: Rep_953_c_5_105
Type: pfam
Location: 122740 - 123621 (-)
Gene ID: Rep_953_c_5_106
Type: TC
Location: 123699 - 124133 (-)
Gene ID: Rep_953_c_5_107
Type: TC
Location: 124138 - 125004 (-)
Gene ID: Rep_953_c_5_108
Type: TC
Location: 125481 - 126392 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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