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Cluster: Rep_953_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_953_c_0 Rep_953_c_0_334 323343 323768 + 3.A.6.2.1
TC Rep_953_c_0 Rep_953_c_0_335 323768 324160 + 3.A.6.2.1
TC Rep_953_c_0 Rep_953_c_0_336 324160 324906 + 3.A.6.2.1
TC Rep_953_c_0 Rep_953_c_0_337 324932 325201 + 3.A.6.2.1
TC Rep_953_c_0 Rep_953_c_0_338 325210 325995 + 3.A.6.2.1
pfam Rep_953_c_0 Rep_953_c_0_339 326082 327062 - Flagellin_N
pfam Rep_953_c_0 Rep_953_c_0_340 327078 328763 - Flg_bb_rod | Flg_bbr_C | flgK_1st_1 | FlgK_D1
CAZyme Rep_953_c_0 Rep_953_c_0_341 329084 330022 - GH73
Gene ID: Rep_953_c_0_334
Type: TC
Location: 323343 - 323768 (+)
Gene ID: Rep_953_c_0_335
Type: TC
Location: 323768 - 324160 (+)
Gene ID: Rep_953_c_0_336
Type: TC
Location: 324160 - 324906 (+)
Gene ID: Rep_953_c_0_337
Type: TC
Location: 324932 - 325201 (+)
Gene ID: Rep_953_c_0_338
Type: TC
Location: 325210 - 325995 (+)
Gene ID: Rep_953_c_0_339
Type: pfam
Location: 326082 - 327062 (-)
Gene ID: Rep_953_c_0_340
Type: pfam
Location: 327078 - 328763 (-)
Gene ID: Rep_953_c_0_341
Type: CAZyme
Location: 329084 - 330022 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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