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Cluster: Rep_951_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_951_c_9 Rep_951_c_9_15 13860 16922 + GH2
pfam Rep_951_c_9 Rep_951_c_9_16 16919 17368 + DUF386
TC Rep_951_c_9 Rep_951_c_9_17 17459 18925 + 2.A.3.7.4
NULL(UNKNOWN) Rep_951_c_9 Rep_951_c_9_18 19205 19705 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_951_c_9 Rep_951_c_9_19 19800 21104 - 2.A.40.5.1
pfam Rep_951_c_9 Rep_951_c_9_20 21213 22190 + 2-Hacid_dh | 2-Hacid_dh_C
NULL(UNKNOWN) Rep_951_c_9 Rep_951_c_9_21 22394 22801 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_951_c_9 Rep_951_c_9_22 22861 23808 - 2.A.4.7.9
Gene ID: Rep_951_c_9_15
Type: CAZyme
Location: 13860 - 16922 (+)
Gene ID: Rep_951_c_9_16
Type: pfam
Location: 16919 - 17368 (+)
Gene ID: Rep_951_c_9_17
Type: TC
Location: 17459 - 18925 (+)
Gene ID: Rep_951_c_9_18
Type:
Location: 19205 - 19705 (-)
Gene ID: Rep_951_c_9_19
Type: TC
Location: 19800 - 21104 (-)
Gene ID: Rep_951_c_9_20
Type: pfam
Location: 21213 - 22190 (+)
Gene ID: Rep_951_c_9_21
Type:
Location: 22394 - 22801 (+)
Gene ID: Rep_951_c_9_22
Type: TC
Location: 22861 - 23808 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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