dbCAN Logo

Cluster: Rep_951_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_951_c_198 Rep_951_c_198_3 2680 3762 + 9.B.146.1.6
pfam Rep_951_c_198 Rep_951_c_198_4 3765 4805 + Mur_ligase_M | MurD-like_N
NULL(UNKNOWN) Rep_951_c_198 Rep_951_c_198_5 4948 5085 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_951_c_198 Rep_951_c_198_6 5082 6275 + 2.A.103.1.1
CAZyme Rep_951_c_198 Rep_951_c_198_7 6272 7345 + GT28
Gene ID: Rep_951_c_198_3
Type: TC
Location: 2680 - 3762 (+)
Gene ID: Rep_951_c_198_4
Type: pfam
Location: 3765 - 4805 (+)
Gene ID: Rep_951_c_198_5
Type:
Location: 4948 - 5085 (+)
Gene ID: Rep_951_c_198_6
Type: TC
Location: 5082 - 6275 (+)
Gene ID: Rep_951_c_198_7
Type: CAZyme
Location: 6272 - 7345 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List