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Cluster: Rep_951_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_951_c_139 Rep_951_c_139_2 830 2980 + 3.A.1.109.4
TC Rep_951_c_139 Rep_951_c_139_3 2982 4205 + 3.A.1.109.4
sulfatase Rep_951_c_139 Rep_951_c_139_4 4352 5245 + S1_15
pfam Rep_951_c_139 Rep_951_c_139_5 5419 6435 + ADH_zinc_N | ADH_N | ADH_zinc_N_2
CAZyme Rep_951_c_139 Rep_951_c_139_6 6611 7258 + GT25
pfam Rep_951_c_139 Rep_951_c_139_7 7309 7794 - DcrB
TC Rep_951_c_139 Rep_951_c_139_8 7821 9461 - 1.B.6.1.14
Gene ID: Rep_951_c_139_2
Type: TC
Location: 830 - 2980 (+)
Gene ID: Rep_951_c_139_3
Type: TC
Location: 2982 - 4205 (+)
Gene ID: Rep_951_c_139_4
Type: sulfatase
Location: 4352 - 5245 (+)
Gene ID: Rep_951_c_139_5
Type: pfam
Location: 5419 - 6435 (+)
Gene ID: Rep_951_c_139_6
Type: CAZyme
Location: 6611 - 7258 (+)
Gene ID: Rep_951_c_139_7
Type: pfam
Location: 7309 - 7794 (-)
Gene ID: Rep_951_c_139_8
Type: TC
Location: 7821 - 9461 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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