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Cluster: Rep_950_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_950_c_4 Rep_950_c_4_149 165301 166350 - 3.A.1.20.2
TC Rep_950_c_4 Rep_950_c_4_150 166367 168445 - 3.A.1.20.2
TC Rep_950_c_4 Rep_950_c_4_151 168552 169583 - 3.A.1.20.2
TC Rep_950_c_4 Rep_950_c_4_152 169601 170929 - 2.A.1.4.4
STP Rep_950_c_4 Rep_950_c_4_153 171016 172563 - HATPase_c | MASE1
TF Rep_950_c_4 Rep_950_c_4_154 172567 173196 - GerE
TC Rep_950_c_4 Rep_950_c_4_155 173341 173754 - 8.A.2.1.3
CAZyme Rep_950_c_4 Rep_950_c_4_156 173899 175503 + AA1
STP Rep_950_c_4 Rep_950_c_4_157 175657 176196 + Pribosyltran
TC Rep_950_c_4 Rep_950_c_4_158 176255 176914 - 2.A.53.3.8
TC Rep_950_c_4 Rep_950_c_4_159 177099 178025 + 3.A.1.105.17
TC Rep_950_c_4 Rep_950_c_4_160 178022 178792 + 3.A.1.105.17
peptidase Rep_950_c_4 Rep_950_c_4_161 179088 180542 + M10.051
pfam Rep_950_c_4 Rep_950_c_4_162 180595 180939 + Inh
TC Rep_950_c_4 Rep_950_c_4_163 181010 182716 + 3.A.1.110.6
TC Rep_950_c_4 Rep_950_c_4_164 182706 184013 + 3.A.1.110.6
Gene ID: Rep_950_c_4_149
Type: TC
Location: 165301 - 166350 (-)
Gene ID: Rep_950_c_4_150
Type: TC
Location: 166367 - 168445 (-)
Gene ID: Rep_950_c_4_151
Type: TC
Location: 168552 - 169583 (-)
Gene ID: Rep_950_c_4_152
Type: TC
Location: 169601 - 170929 (-)
Gene ID: Rep_950_c_4_153
Type: STP
Location: 171016 - 172563 (-)
Gene ID: Rep_950_c_4_154
Type: TF
Location: 172567 - 173196 (-)
Gene ID: Rep_950_c_4_155
Type: TC
Location: 173341 - 173754 (-)
Gene ID: Rep_950_c_4_156
Type: CAZyme
Location: 173899 - 175503 (+)
Gene ID: Rep_950_c_4_157
Type: STP
Location: 175657 - 176196 (+)
Gene ID: Rep_950_c_4_158
Type: TC
Location: 176255 - 176914 (-)
Gene ID: Rep_950_c_4_159
Type: TC
Location: 177099 - 178025 (+)
Gene ID: Rep_950_c_4_160
Type: TC
Location: 178022 - 178792 (+)
Gene ID: Rep_950_c_4_161
Type: peptidase
Location: 179088 - 180542 (+)
Gene ID: Rep_950_c_4_162
Type: pfam
Location: 180595 - 180939 (+)
Gene ID: Rep_950_c_4_163
Type: TC
Location: 181010 - 182716 (+)
Gene ID: Rep_950_c_4_164
Type: TC
Location: 182706 - 184013 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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