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Cluster: Rep_950_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_950_c_22 Rep_950_c_22_2 1380 3257 - GH3
TC Rep_950_c_22 Rep_950_c_22_3 3796 4239 - 2.A.117.1.4
TF Rep_950_c_22 Rep_950_c_22_4 4347 4922 + HTH_1
STP Rep_950_c_22 Rep_950_c_22_5 4980 5243 + LysR_substrate
TC Rep_950_c_22 Rep_950_c_22_6 5285 5911 + 3.A.1.5.3
peptidase Rep_950_c_22 Rep_950_c_22_7 5991 7571 + S09.UNW
pfam Rep_950_c_22 Rep_950_c_22_8 7653 9089 + Alk_phosphatase | Alk_phosphatase
TC Rep_950_c_22 Rep_950_c_22_9 9508 11088 + 2.A.58.2.1
Gene ID: Rep_950_c_22_2
Type: CAZyme
Location: 1380 - 3257 (-)
Gene ID: Rep_950_c_22_3
Type: TC
Location: 3796 - 4239 (-)
Gene ID: Rep_950_c_22_4
Type: TF
Location: 4347 - 4922 (+)
Gene ID: Rep_950_c_22_5
Type: STP
Location: 4980 - 5243 (+)
Gene ID: Rep_950_c_22_6
Type: TC
Location: 5285 - 5911 (+)
Gene ID: Rep_950_c_22_7
Type: peptidase
Location: 5991 - 7571 (+)
Gene ID: Rep_950_c_22_8
Type: pfam
Location: 7653 - 9089 (+)
Gene ID: Rep_950_c_22_9
Type: TC
Location: 9508 - 11088 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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