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Cluster: Rep_950_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_950_c_14 Rep_950_c_14_44 36164 37288 - GT9
TC Rep_950_c_14 Rep_950_c_14_45 37370 38263 - 2.A.7.17.1
pfam Rep_950_c_14 Rep_950_c_14_46 38365 38928 + DUF924
TC Rep_950_c_14 Rep_950_c_14_47 38905 40188 - 1.A.23.4.5
TC Rep_950_c_14 Rep_950_c_14_48 40386 40958 - 9.B.36.1.1
TF Rep_950_c_14 Rep_950_c_14_49 41102 41659 - HTH_3
TC Rep_950_c_14 Rep_950_c_14_50 41766 42428 + 2.A.78.2.3
TC Rep_950_c_14 Rep_950_c_14_51 42428 42754 + 2.A.78.2.3
Gene ID: Rep_950_c_14_44
Type: CAZyme
Location: 36164 - 37288 (-)
Gene ID: Rep_950_c_14_45
Type: TC
Location: 37370 - 38263 (-)
Gene ID: Rep_950_c_14_46
Type: pfam
Location: 38365 - 38928 (+)
Gene ID: Rep_950_c_14_47
Type: TC
Location: 38905 - 40188 (-)
Gene ID: Rep_950_c_14_48
Type: TC
Location: 40386 - 40958 (-)
Gene ID: Rep_950_c_14_49
Type: TF
Location: 41102 - 41659 (-)
Gene ID: Rep_950_c_14_50
Type: TC
Location: 41766 - 42428 (+)
Gene ID: Rep_950_c_14_51
Type: TC
Location: 42428 - 42754 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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