Cluster: Rep_948_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_948
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_948_c_5 | Rep_948_c_5_23 | 23316 | 24173 | - | 3.A.1.15.4 |
| TC | Rep_948_c_5 | Rep_948_c_5_24 | 24170 | 25081 | - | 3.A.1.15.4 |
| TC | Rep_948_c_5 | Rep_948_c_5_25 | 25084 | 25971 | - | 3.A.1.15.4 |
| TC | Rep_948_c_5 | Rep_948_c_5_26 | 25968 | 26876 | - | 3.A.1.15.4 |
| CAZyme | Rep_948_c_5 | Rep_948_c_5_27 | 27267 | 27968 | + | GH23 |
| TC | Rep_948_c_5 | Rep_948_c_5_28 | 27920 | 28654 | - | 2.A.95.1.1 |
Gene ID: Rep_948_c_5_23
Type: TC
Location: 23316 - 24173 (-)
Type: TC
Location: 23316 - 24173 (-)
Gene ID: Rep_948_c_5_24
Type: TC
Location: 24170 - 25081 (-)
Type: TC
Location: 24170 - 25081 (-)
Gene ID: Rep_948_c_5_25
Type: TC
Location: 25084 - 25971 (-)
Type: TC
Location: 25084 - 25971 (-)
Gene ID: Rep_948_c_5_26
Type: TC
Location: 25968 - 26876 (-)
Type: TC
Location: 25968 - 26876 (-)
Gene ID: Rep_948_c_5_27
Type: CAZyme
Location: 27267 - 27968 (+)
Type: CAZyme
Location: 27267 - 27968 (+)
Gene ID: Rep_948_c_5_28
Type: TC
Location: 27920 - 28654 (-)
Type: TC
Location: 27920 - 28654 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Proteus
Species
Proteus mirabilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.