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Cluster: Rep_948_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_948_c_2 Rep_948_c_2_106 125294 126523 - 2.A.1.82.4
TC Rep_948_c_2 Rep_948_c_2_107 126713 127483 - 3.A.1.105.17
TC Rep_948_c_2 Rep_948_c_2_108 127480 128421 - 3.A.1.105.17
TC Rep_948_c_2 Rep_948_c_2_109 129268 129921 + 2.A.53.3.8
STP Rep_948_c_2 Rep_948_c_2_110 129981 130523 - Pribosyltran
CAZyme Rep_948_c_2 Rep_948_c_2_111 130682 132262 - AA1
TC Rep_948_c_2 Rep_948_c_2_112 132475 132825 + 8.A.2.1.3
Gene ID: Rep_948_c_2_106
Type: TC
Location: 125294 - 126523 (-)
Gene ID: Rep_948_c_2_107
Type: TC
Location: 126713 - 127483 (-)
Gene ID: Rep_948_c_2_108
Type: TC
Location: 127480 - 128421 (-)
Gene ID: Rep_948_c_2_109
Type: TC
Location: 129268 - 129921 (+)
Gene ID: Rep_948_c_2_110
Type: STP
Location: 129981 - 130523 (-)
Gene ID: Rep_948_c_2_111
Type: CAZyme
Location: 130682 - 132262 (-)
Gene ID: Rep_948_c_2_112
Type: TC
Location: 132475 - 132825 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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