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Cluster: Rep_948_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_948_c_36 Rep_948_c_36_314 384505 387570 + PL8_2
CAZyme Rep_948_c_36 Rep_948_c_36_315 387628 390669 + PL8_2
CAZyme Rep_948_c_36 Rep_948_c_36_316 391592 392662 - GH105
sulfatase Rep_948_c_36 Rep_948_c_36_317 392680 393435 - S1_2
pfam Rep_948_c_36 Rep_948_c_36_318 393517 394347 - KduI
CAZyme Rep_948_c_36 Rep_948_c_36_319 394390 395559 - CE9
TC Rep_948_c_36 Rep_948_c_36_320 395556 395990 - 4.A.6.1.16
TC Rep_948_c_36 Rep_948_c_36_321 396090 396980 - 4.A.6.1.4
TC Rep_948_c_36 Rep_948_c_36_322 396970 397737 - 4.A.6.1.4
TC Rep_948_c_36 Rep_948_c_36_323 397787 398281 - 4.A.6.1.4
Gene ID: Rep_948_c_36_314
Type: CAZyme
Location: 384505 - 387570 (+)
Gene ID: Rep_948_c_36_315
Type: CAZyme
Location: 387628 - 390669 (+)
Gene ID: Rep_948_c_36_316
Type: CAZyme
Location: 391592 - 392662 (-)
Gene ID: Rep_948_c_36_317
Type: sulfatase
Location: 392680 - 393435 (-)
Gene ID: Rep_948_c_36_318
Type: pfam
Location: 393517 - 394347 (-)
Gene ID: Rep_948_c_36_319
Type: CAZyme
Location: 394390 - 395559 (-)
Gene ID: Rep_948_c_36_320
Type: TC
Location: 395556 - 395990 (-)
Gene ID: Rep_948_c_36_321
Type: TC
Location: 396090 - 396980 (-)
Gene ID: Rep_948_c_36_322
Type: TC
Location: 396970 - 397737 (-)
Gene ID: Rep_948_c_36_323
Type: TC
Location: 397787 - 398281 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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