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Cluster: Rep_948_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_948_c_29 Rep_948_c_29_135 148944 149972 - GH8
pfam Rep_948_c_29 Rep_948_c_29_136 150046 151008 - NTP_transferase | NTP_transf_3
TC Rep_948_c_29 Rep_948_c_29_137 151182 152087 - 9.B.34.1.2
pfam Rep_948_c_29 Rep_948_c_29_138 152126 152596 - Cellsynth_D
TC Rep_948_c_29 Rep_948_c_29_139 152612 155938 - 1.B.55.3.1
NULL(UNKNOWN) Rep_948_c_29 Rep_948_c_29_140 155974 156297 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_948_c_29 Rep_948_c_29_141 156308 158656 - BcsB
CAZyme Rep_948_c_29 Rep_948_c_29_142 158659 160773 - GT2
Gene ID: Rep_948_c_29_135
Type: CAZyme
Location: 148944 - 149972 (-)
Gene ID: Rep_948_c_29_136
Type: pfam
Location: 150046 - 151008 (-)
Gene ID: Rep_948_c_29_137
Type: TC
Location: 151182 - 152087 (-)
Gene ID: Rep_948_c_29_138
Type: pfam
Location: 152126 - 152596 (-)
Gene ID: Rep_948_c_29_139
Type: TC
Location: 152612 - 155938 (-)
Gene ID: Rep_948_c_29_140
Type:
Location: 155974 - 156297 (-)
Gene ID: Rep_948_c_29_141
Type: pfam
Location: 156308 - 158656 (-)
Gene ID: Rep_948_c_29_142
Type: CAZyme
Location: 158659 - 160773 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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