Cluster: Rep_948_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_948
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_948_c_29 | Rep_948_c_29_52 | 59095 | 60351 | + | 2.A.66.2.13 |
| pfam | Rep_948_c_29 | Rep_948_c_29_53 | 60359 | 61450 | + | EpsG |
| CAZyme | Rep_948_c_29 | Rep_948_c_29_54 | 61459 | 62436 | + | GT2 |
| pfam | Rep_948_c_29 | Rep_948_c_29_55 | 62433 | 63368 | + | ATPgrasp_TupA |
| CAZyme | Rep_948_c_29 | Rep_948_c_29_56 | 63352 | 64200 | + | GT2 |
| pfam | Rep_948_c_29 | Rep_948_c_29_57 | 64197 | 65075 | + | ATPgrasp_TupA |
| CAZyme | Rep_948_c_29 | Rep_948_c_29_58 | 65062 | 66186 | + | GT4 |
Gene ID: Rep_948_c_29_52
Type: TC
Location: 59095 - 60351 (+)
Type: TC
Location: 59095 - 60351 (+)
Gene ID: Rep_948_c_29_53
Type: pfam
Location: 60359 - 61450 (+)
Type: pfam
Location: 60359 - 61450 (+)
Gene ID: Rep_948_c_29_54
Type: CAZyme
Location: 61459 - 62436 (+)
Type: CAZyme
Location: 61459 - 62436 (+)
Gene ID: Rep_948_c_29_55
Type: pfam
Location: 62433 - 63368 (+)
Type: pfam
Location: 62433 - 63368 (+)
Gene ID: Rep_948_c_29_56
Type: CAZyme
Location: 63352 - 64200 (+)
Type: CAZyme
Location: 63352 - 64200 (+)
Gene ID: Rep_948_c_29_57
Type: pfam
Location: 64197 - 65075 (+)
Type: pfam
Location: 64197 - 65075 (+)
Gene ID: Rep_948_c_29_58
Type: CAZyme
Location: 65062 - 66186 (+)
Type: CAZyme
Location: 65062 - 66186 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Proteus
Species
Proteus mirabilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.