Cluster: Rep_947_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_947
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_947_c_5 | Rep_947_c_5_83 | 98512 | 100176 | + | GH23 |
| pfam | Rep_947_c_5 | Rep_947_c_5_84 | 100217 | 100699 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TC | Rep_947_c_5 | Rep_947_c_5_85 | 100795 | 101442 | - | 2.A.76.1.5 |
Gene ID: Rep_947_c_5_83
Type: CAZyme
Location: 98512 - 100176 (+)
Type: CAZyme
Location: 98512 - 100176 (+)
Gene ID: Rep_947_c_5_84
Type: pfam
Location: 100217 - 100699 (-)
Type: pfam
Location: 100217 - 100699 (-)
Gene ID: Rep_947_c_5_85
Type: TC
Location: 100795 - 101442 (-)
Type: TC
Location: 100795 - 101442 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.