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Cluster: Rep_947_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_947_c_4 Rep_947_c_4_109 120983 121411 + 2.A.6.2.32
TC Rep_947_c_4 Rep_947_c_4_110 121424 122533 + 2.A.6.2.32
TC Rep_947_c_4 Rep_947_c_4_111 122544 125648 + 2.A.6.2.32
NULL(UNKNOWN) Rep_947_c_4 Rep_947_c_4_112 125645 125821 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_947_c_4 Rep_947_c_4_113 125888 127534 - GT83
STP Rep_947_c_4 Rep_947_c_4_114 127903 129177 - Aminotran_1_2
TC Rep_947_c_4 Rep_947_c_4_115 129512 130741 - 1.B.25.1.14
sulfatase Rep_947_c_4 Rep_947_c_4_116 131060 132268 + S1_44
pfam Rep_947_c_4 Rep_947_c_4_117 132319 133092 - PNP_UDP_1
TC Rep_947_c_4 Rep_947_c_4_118 133304 134518 - 2.A.1.7.14
Gene ID: Rep_947_c_4_109
Type: TC
Location: 120983 - 121411 (+)
Gene ID: Rep_947_c_4_110
Type: TC
Location: 121424 - 122533 (+)
Gene ID: Rep_947_c_4_111
Type: TC
Location: 122544 - 125648 (+)
Gene ID: Rep_947_c_4_112
Type:
Location: 125645 - 125821 (+)
Gene ID: Rep_947_c_4_113
Type: CAZyme
Location: 125888 - 127534 (-)
Gene ID: Rep_947_c_4_114
Type: STP
Location: 127903 - 129177 (-)
Gene ID: Rep_947_c_4_115
Type: TC
Location: 129512 - 130741 (-)
Gene ID: Rep_947_c_4_116
Type: sulfatase
Location: 131060 - 132268 (+)
Gene ID: Rep_947_c_4_117
Type: pfam
Location: 132319 - 133092 (-)
Gene ID: Rep_947_c_4_118
Type: TC
Location: 133304 - 134518 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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