Cluster: Rep_947_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_947
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_947_c_4 | Rep_947_c_4_32 | 31960 | 32859 | - | 2.A.7.3.61 |
| TC | Rep_947_c_4 | Rep_947_c_4_33 | 32917 | 34566 | - | 2.A.36.3.1 |
| TC | Rep_947_c_4 | Rep_947_c_4_34 | 34830 | 36176 | - | 2.A.40.7.7 |
| CAZyme | Rep_947_c_4 | Rep_947_c_4_35 | 36792 | 38480 | + | GT83 |
Gene ID: Rep_947_c_4_32
Type: TC
Location: 31960 - 32859 (-)
Type: TC
Location: 31960 - 32859 (-)
Gene ID: Rep_947_c_4_33
Type: TC
Location: 32917 - 34566 (-)
Type: TC
Location: 32917 - 34566 (-)
Gene ID: Rep_947_c_4_34
Type: TC
Location: 34830 - 36176 (-)
Type: TC
Location: 34830 - 36176 (-)
Gene ID: Rep_947_c_4_35
Type: CAZyme
Location: 36792 - 38480 (+)
Type: CAZyme
Location: 36792 - 38480 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.