Cluster: Rep_947_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_947
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_947_c_1 | Rep_947_c_1_163 | 177190 | 178425 | - | 2.A.1.14.35 |
| pfam | Rep_947_c_1 | Rep_947_c_1_164 | 178750 | 179862 | - | MR_MLE_N | MR_MLE_C |
| CAZyme | Rep_947_c_1 | Rep_947_c_1_165 | 180156 | 181475 | + | CE4 |
Gene ID: Rep_947_c_1_163
Type: TC
Location: 177190 - 178425 (-)
Type: TC
Location: 177190 - 178425 (-)
Gene ID: Rep_947_c_1_164
Type: pfam
Location: 178750 - 179862 (-)
Type: pfam
Location: 178750 - 179862 (-)
Gene ID: Rep_947_c_1_165
Type: CAZyme
Location: 180156 - 181475 (+)
Type: CAZyme
Location: 180156 - 181475 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.