Cluster: Rep_947_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_947
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_947_c_0 | Rep_947_c_0_257 | 270696 | 271481 | - | 3.A.1.15.5 |
| TC | Rep_947_c_0 | Rep_947_c_0_258 | 271474 | 272241 | - | 3.A.1.15.5 |
| TC | Rep_947_c_0 | Rep_947_c_0_259 | 272318 | 273277 | + | 3.A.1.15.5 |
| CAZyme | Rep_947_c_0 | Rep_947_c_0_260 | 273298 | 274638 | + | CBM50 |
Gene ID: Rep_947_c_0_257
Type: TC
Location: 270696 - 271481 (-)
Type: TC
Location: 270696 - 271481 (-)
Gene ID: Rep_947_c_0_258
Type: TC
Location: 271474 - 272241 (-)
Type: TC
Location: 271474 - 272241 (-)
Gene ID: Rep_947_c_0_259
Type: TC
Location: 272318 - 273277 (+)
Type: TC
Location: 272318 - 273277 (+)
Gene ID: Rep_947_c_0_260
Type: CAZyme
Location: 273298 - 274638 (+)
Type: CAZyme
Location: 273298 - 274638 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.