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Cluster: Rep_947_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_947_c_50 Rep_947_c_50_9 11110 12990 + GH3
pfam Rep_947_c_50 Rep_947_c_50_10 13114 14070 + Porin_OmpG
TC Rep_947_c_50 Rep_947_c_50_11 14221 15234 - 3.A.1.6.1
TC Rep_947_c_50 Rep_947_c_50_12 15637 16077 - 2.A.117.1.4
TC Rep_947_c_50 Rep_947_c_50_13 16327 17265 - 3.A.1.17.2
pfam Rep_947_c_50 Rep_947_c_50_14 17313 18464 - Bac_luciferase
TC Rep_947_c_50 Rep_947_c_50_15 18514 19254 - 3.A.1.17.2
TC Rep_947_c_50 Rep_947_c_50_16 19251 20030 - 3.A.1.17.2
Gene ID: Rep_947_c_50_9
Type: CAZyme
Location: 11110 - 12990 (+)
Gene ID: Rep_947_c_50_10
Type: pfam
Location: 13114 - 14070 (+)
Gene ID: Rep_947_c_50_11
Type: TC
Location: 14221 - 15234 (-)
Gene ID: Rep_947_c_50_12
Type: TC
Location: 15637 - 16077 (-)
Gene ID: Rep_947_c_50_13
Type: TC
Location: 16327 - 17265 (-)
Gene ID: Rep_947_c_50_14
Type: pfam
Location: 17313 - 18464 (-)
Gene ID: Rep_947_c_50_15
Type: TC
Location: 18514 - 19254 (-)
Gene ID: Rep_947_c_50_16
Type: TC
Location: 19251 - 20030 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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