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Cluster: Rep_947_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_947_c_30 Rep_947_c_30_17 14454 14789 + 2.A.7.1.11
pfam Rep_947_c_30 Rep_947_c_30_18 15075 15449 + GtrA_DPMS_TM
CAZyme Rep_947_c_30 Rep_947_c_30_19 15446 16384 + GT2
pfam Rep_947_c_30 Rep_947_c_30_20 16377 17981 + DUF6056
CAZyme Rep_947_c_30 Rep_947_c_30_21 18164 19303 - GH177
pfam Rep_947_c_30 Rep_947_c_30_22 19315 20379 - AP_endonuc_2
pfam Rep_947_c_30 Rep_947_c_30_23 20376 21452 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC Rep_947_c_30 Rep_947_c_30_24 21454 22704 - 2.A.1.10.4
pfam Rep_947_c_30 Rep_947_c_30_25 22732 23649 - Acetyltransf_1 | Acetyltransf_7
TF Rep_947_c_30 Rep_947_c_30_26 23919 24899 + LacI
TC Rep_947_c_30 Rep_947_c_30_27 25134 27104 - 3.A.1.14.3
TC Rep_947_c_30 Rep_947_c_30_28 27094 28020 - 3.A.1.14.1
TC Rep_947_c_30 Rep_947_c_30_29 28011 28793 - 3.A.1.14.3
TC Rep_947_c_30 Rep_947_c_30_30 28842 30917 - 1.B.14.1.10
TC Rep_947_c_30 Rep_947_c_30_31 31206 32837 - 2.A.21.3.2
Gene ID: Rep_947_c_30_17
Type: TC
Location: 14454 - 14789 (+)
Gene ID: Rep_947_c_30_18
Type: pfam
Location: 15075 - 15449 (+)
Gene ID: Rep_947_c_30_19
Type: CAZyme
Location: 15446 - 16384 (+)
Gene ID: Rep_947_c_30_20
Type: pfam
Location: 16377 - 17981 (+)
Gene ID: Rep_947_c_30_21
Type: CAZyme
Location: 18164 - 19303 (-)
Gene ID: Rep_947_c_30_22
Type: pfam
Location: 19315 - 20379 (-)
Gene ID: Rep_947_c_30_23
Type: pfam
Location: 20376 - 21452 (-)
Gene ID: Rep_947_c_30_24
Type: TC
Location: 21454 - 22704 (-)
Gene ID: Rep_947_c_30_25
Type: pfam
Location: 22732 - 23649 (-)
Gene ID: Rep_947_c_30_26
Type: TF
Location: 23919 - 24899 (+)
Gene ID: Rep_947_c_30_27
Type: TC
Location: 25134 - 27104 (-)
Gene ID: Rep_947_c_30_28
Type: TC
Location: 27094 - 28020 (-)
Gene ID: Rep_947_c_30_29
Type: TC
Location: 28011 - 28793 (-)
Gene ID: Rep_947_c_30_30
Type: TC
Location: 28842 - 30917 (-)
Gene ID: Rep_947_c_30_31
Type: TC
Location: 31206 - 32837 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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