Cluster: Rep_947_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_947
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_947_c_29 | Rep_947_c_29_24 | 30018 | 31268 | + | 2.A.66.2.3 |
| CAZyme | Rep_947_c_29 | Rep_947_c_29_25 | 31265 | 32347 | + | GT56 |
| TC | Rep_947_c_29 | Rep_947_c_29_26 | 32344 | 33699 | + | 9.B.128.1.1 |
| CAZyme | Rep_947_c_29 | Rep_947_c_29_27 | 33709 | 34476 | + | GT26 |
| TC | Rep_947_c_29 | Rep_947_c_29_28 | 34766 | 36142 | + | 2.A.3.1.15 |
Gene ID: Rep_947_c_29_24
Type: TC
Location: 30018 - 31268 (+)
Type: TC
Location: 30018 - 31268 (+)
Gene ID: Rep_947_c_29_25
Type: CAZyme
Location: 31265 - 32347 (+)
Type: CAZyme
Location: 31265 - 32347 (+)
Gene ID: Rep_947_c_29_26
Type: TC
Location: 32344 - 33699 (+)
Type: TC
Location: 32344 - 33699 (+)
Gene ID: Rep_947_c_29_27
Type: CAZyme
Location: 33709 - 34476 (+)
Type: CAZyme
Location: 33709 - 34476 (+)
Gene ID: Rep_947_c_29_28
Type: TC
Location: 34766 - 36142 (+)
Type: TC
Location: 34766 - 36142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.