Cluster: Rep_947_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_947
- CGC Family ID: CGCFAM_09878
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_947_c_24 | Rep_947_c_24_28 | 33613 | 35100 | + | GH154 |
| pfam | Rep_947_c_24 | Rep_947_c_24_29 | 35216 | 36070 | + | F_bP_aldolase |
| peptidase | Rep_947_c_24 | Rep_947_c_24_30 | 36161 | 36739 | + | C56.UNW |
| TC | Rep_947_c_24 | Rep_947_c_24_31 | 36976 | 38277 | + | 2.A.40.5.1 |
| TC | Rep_947_c_24 | Rep_947_c_24_32 | 38358 | 39359 | - | 3.A.1.17.2 |
| TC | Rep_947_c_24 | Rep_947_c_24_33 | 39372 | 40139 | - | 3.A.1.16.1 |
| TC | Rep_947_c_24 | Rep_947_c_24_34 | 40142 | 40900 | - | 3.A.1.17.4 |
Gene ID: Rep_947_c_24_28
Type: CAZyme
Location: 33613 - 35100 (+)
Type: CAZyme
Location: 33613 - 35100 (+)
Gene ID: Rep_947_c_24_29
Type: pfam
Location: 35216 - 36070 (+)
Type: pfam
Location: 35216 - 36070 (+)
Gene ID: Rep_947_c_24_30
Type: peptidase
Location: 36161 - 36739 (+)
Type: peptidase
Location: 36161 - 36739 (+)
Gene ID: Rep_947_c_24_31
Type: TC
Location: 36976 - 38277 (+)
Type: TC
Location: 36976 - 38277 (+)
Gene ID: Rep_947_c_24_32
Type: TC
Location: 38358 - 39359 (-)
Type: TC
Location: 38358 - 39359 (-)
Gene ID: Rep_947_c_24_33
Type: TC
Location: 39372 - 40139 (-)
Type: TC
Location: 39372 - 40139 (-)
Gene ID: Rep_947_c_24_34
Type: TC
Location: 40142 - 40900 (-)
Type: TC
Location: 40142 - 40900 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.