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Cluster: Rep_947_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_947_c_0 Rep_947_c_0_86 88868 89869 + 3.A.1.13.1
TC Rep_947_c_0 Rep_947_c_0_87 89872 90642 + 3.A.1.13.1
STP Rep_947_c_0 Rep_947_c_0_88 90769 91914 + Aminotran_1_2
CAZyme Rep_947_c_0 Rep_947_c_0_89 91914 92906 + GT2
pfam Rep_947_c_0 Rep_947_c_0_90 92906 94891 + Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam Rep_947_c_0 Rep_947_c_0_91 94891 95784 + Polysacc_deac_1
CAZyme Rep_947_c_0 Rep_947_c_0_92 95792 97450 + GT83
TC Rep_947_c_0 Rep_947_c_0_93 97447 97794 + 2.A.7.22.2
TC Rep_947_c_0 Rep_947_c_0_94 97791 98198 + 2.A.7.22.1
Gene ID: Rep_947_c_0_86
Type: TC
Location: 88868 - 89869 (+)
Gene ID: Rep_947_c_0_87
Type: TC
Location: 89872 - 90642 (+)
Gene ID: Rep_947_c_0_88
Type: STP
Location: 90769 - 91914 (+)
Gene ID: Rep_947_c_0_89
Type: CAZyme
Location: 91914 - 92906 (+)
Gene ID: Rep_947_c_0_90
Type: pfam
Location: 92906 - 94891 (+)
Gene ID: Rep_947_c_0_91
Type: pfam
Location: 94891 - 95784 (+)
Gene ID: Rep_947_c_0_92
Type: CAZyme
Location: 95792 - 97450 (+)
Gene ID: Rep_947_c_0_93
Type: TC
Location: 97447 - 97794 (+)
Gene ID: Rep_947_c_0_94
Type: TC
Location: 97791 - 98198 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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