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Cluster: Rep_947_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_947_c_24 Rep_947_c_24_11 14115 15488 - 2.A.61.1.1
peptidase Rep_947_c_24 Rep_947_c_24_12 15485 16738 - M20.UPB
sulfatase Rep_947_c_24 Rep_947_c_24_13 17629 19188 + S1_27
TC Rep_947_c_24 Rep_947_c_24_14 19313 20032 + 1.B.35.1.7
CAZyme Rep_947_c_24 Rep_947_c_24_15 20207 21274 - GH105
sulfatase Rep_947_c_24 Rep_947_c_24_16 21292 22047 - S1_2
pfam Rep_947_c_24 Rep_947_c_24_17 22116 22946 - KduI
CAZyme Rep_947_c_24 Rep_947_c_24_18 22984 24156 - CE9
TC Rep_947_c_24 Rep_947_c_24_19 24153 24584 - 4.A.6.1.16
TC Rep_947_c_24 Rep_947_c_24_20 24647 25534 - 4.A.6.1.4
TC Rep_947_c_24 Rep_947_c_24_21 25524 26294 - 4.A.6.1.4
TC Rep_947_c_24 Rep_947_c_24_22 26343 26837 - 4.A.6.1.4
Gene ID: Rep_947_c_24_11
Type: TC
Location: 14115 - 15488 (-)
Gene ID: Rep_947_c_24_12
Type: peptidase
Location: 15485 - 16738 (-)
Gene ID: Rep_947_c_24_13
Type: sulfatase
Location: 17629 - 19188 (+)
Gene ID: Rep_947_c_24_14
Type: TC
Location: 19313 - 20032 (+)
Gene ID: Rep_947_c_24_15
Type: CAZyme
Location: 20207 - 21274 (-)
Gene ID: Rep_947_c_24_16
Type: sulfatase
Location: 21292 - 22047 (-)
Gene ID: Rep_947_c_24_17
Type: pfam
Location: 22116 - 22946 (-)
Gene ID: Rep_947_c_24_18
Type: CAZyme
Location: 22984 - 24156 (-)
Gene ID: Rep_947_c_24_19
Type: TC
Location: 24153 - 24584 (-)
Gene ID: Rep_947_c_24_20
Type: TC
Location: 24647 - 25534 (-)
Gene ID: Rep_947_c_24_21
Type: TC
Location: 25524 - 26294 (-)
Gene ID: Rep_947_c_24_22
Type: TC
Location: 26343 - 26837 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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