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Cluster: Rep_947_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_947_c_22 Rep_947_c_22_21 24622 25398 + 3.A.1.8.1
TC Rep_947_c_22 Rep_947_c_22_22 25424 26113 + 3.A.1.8.1
TC Rep_947_c_22 Rep_947_c_22_23 26115 27182 + 3.A.1.8.1
pfam Rep_947_c_22 Rep_947_c_22_24 27301 28785 - Mannitol_dh | Mannitol_dh_C
TC Rep_947_c_22 Rep_947_c_22_25 29252 30589 + 2.A.1.6.5
pfam Rep_947_c_22 Rep_947_c_22_26 30630 31373 + Glucosamine_iso
CAZyme Rep_947_c_22 Rep_947_c_22_27 31398 32429 + CE9
Gene ID: Rep_947_c_22_21
Type: TC
Location: 24622 - 25398 (+)
Gene ID: Rep_947_c_22_22
Type: TC
Location: 25424 - 26113 (+)
Gene ID: Rep_947_c_22_23
Type: TC
Location: 26115 - 27182 (+)
Gene ID: Rep_947_c_22_24
Type: pfam
Location: 27301 - 28785 (-)
Gene ID: Rep_947_c_22_25
Type: TC
Location: 29252 - 30589 (+)
Gene ID: Rep_947_c_22_26
Type: pfam
Location: 30630 - 31373 (+)
Gene ID: Rep_947_c_22_27
Type: CAZyme
Location: 31398 - 32429 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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