Cluster: Rep_947_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_947
- CGC Family ID: CGCFAM_00205
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_947_c_22 | Rep_947_c_22_10 | 10605 | 10925 | + | 4.A.2.1.10 |
| TC | Rep_947_c_22 | Rep_947_c_22_11 | 10912 | 12030 | + | 4.A.2.1.10 |
| CAZyme | Rep_947_c_22 | Rep_947_c_22_12 | 12122 | 14707 | + | GH38 |
| TC | Rep_947_c_22 | Rep_947_c_22_13 | 14725 | 16275 | + | 4.A.2.1.10 |
Gene ID: Rep_947_c_22_10
Type: TC
Location: 10605 - 10925 (+)
Type: TC
Location: 10605 - 10925 (+)
Gene ID: Rep_947_c_22_11
Type: TC
Location: 10912 - 12030 (+)
Type: TC
Location: 10912 - 12030 (+)
Gene ID: Rep_947_c_22_12
Type: CAZyme
Location: 12122 - 14707 (+)
Type: CAZyme
Location: 12122 - 14707 (+)
Gene ID: Rep_947_c_22_13
Type: TC
Location: 14725 - 16275 (+)
Type: TC
Location: 14725 - 16275 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.