Cluster: Rep_947_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_947
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_947_c_20 | Rep_947_c_20_38 | 42316 | 43143 | - | 2.A.7.7.2 |
| STP | Rep_947_c_20 | Rep_947_c_20_39 | 43316 | 44263 | - | PfkB |
| CAZyme | Rep_947_c_20 | Rep_947_c_20_40 | 44467 | 45921 | + | GH32 |
Gene ID: Rep_947_c_20_38
Type: TC
Location: 42316 - 43143 (-)
Type: TC
Location: 42316 - 43143 (-)
Gene ID: Rep_947_c_20_39
Type: STP
Location: 43316 - 44263 (-)
Type: STP
Location: 43316 - 44263 (-)
Gene ID: Rep_947_c_20_40
Type: CAZyme
Location: 44467 - 45921 (+)
Type: CAZyme
Location: 44467 - 45921 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia rettgeri_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.