dbCAN Logo

Cluster: Rep_946_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_946_c_31 Rep_946_c_31_2 1989 4610 + 3.A.7.7.1
NULL(UNKNOWN) Rep_946_c_31 Rep_946_c_31_3 4719 4883 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_946_c_31 Rep_946_c_31_4 4900 5256 - DNA_binding_1
TC Rep_946_c_31 Rep_946_c_31_5 5323 6876 - 1.B.52.2.1
CAZyme Rep_946_c_31 Rep_946_c_31_6 7089 8954 - GH20
pfam Rep_946_c_31 Rep_946_c_31_7 8939 9811 - BcrAD_BadFG
CAZyme Rep_946_c_31 Rep_946_c_31_8 9804 11519 - GH9
TC Rep_946_c_31 Rep_946_c_31_9 11634 12626 - 3.A.1.5.20
TC Rep_946_c_31 Rep_946_c_31_10 12638 13657 - 3.A.1.5.15
TC Rep_946_c_31 Rep_946_c_31_11 13654 14574 - 3.A.1.5.14
TC Rep_946_c_31 Rep_946_c_31_12 14576 15559 - 3.A.1.5.16
TC Rep_946_c_31 Rep_946_c_31_13 15678 17363 - 3.A.1.5.6
Gene ID: Rep_946_c_31_2
Type: TC
Location: 1989 - 4610 (+)
Gene ID: Rep_946_c_31_3
Type:
Location: 4719 - 4883 (+)
Gene ID: Rep_946_c_31_4
Type: pfam
Location: 4900 - 5256 (-)
Gene ID: Rep_946_c_31_5
Type: TC
Location: 5323 - 6876 (-)
Gene ID: Rep_946_c_31_6
Type: CAZyme
Location: 7089 - 8954 (-)
Gene ID: Rep_946_c_31_7
Type: pfam
Location: 8939 - 9811 (-)
Gene ID: Rep_946_c_31_8
Type: CAZyme
Location: 9804 - 11519 (-)
Gene ID: Rep_946_c_31_9
Type: TC
Location: 11634 - 12626 (-)
Gene ID: Rep_946_c_31_10
Type: TC
Location: 12638 - 13657 (-)
Gene ID: Rep_946_c_31_11
Type: TC
Location: 13654 - 14574 (-)
Gene ID: Rep_946_c_31_12
Type: TC
Location: 14576 - 15559 (-)
Gene ID: Rep_946_c_31_13
Type: TC
Location: 15678 - 17363 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List