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Cluster: Rep_946_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_946_c_26 Rep_946_c_26_24 22140 22583 + 4.A.7.1.2
TC Rep_946_c_26 Rep_946_c_26_25 22619 22906 + 4.A.7.1.2
TC Rep_946_c_26 Rep_946_c_26_26 22958 24217 + 4.A.7.1.2
CAZyme Rep_946_c_26 Rep_946_c_26_27 24296 25561 - GT30
CAZyme Rep_946_c_26 Rep_946_c_26_28 25563 26597 - GT9
CAZyme Rep_946_c_26 Rep_946_c_26_29 26874 27650 + GT2
CAZyme Rep_946_c_26 Rep_946_c_26_30 27702 28739 - GT9
Gene ID: Rep_946_c_26_24
Type: TC
Location: 22140 - 22583 (+)
Gene ID: Rep_946_c_26_25
Type: TC
Location: 22619 - 22906 (+)
Gene ID: Rep_946_c_26_26
Type: TC
Location: 22958 - 24217 (+)
Gene ID: Rep_946_c_26_27
Type: CAZyme
Location: 24296 - 25561 (-)
Gene ID: Rep_946_c_26_28
Type: CAZyme
Location: 25563 - 26597 (-)
Gene ID: Rep_946_c_26_29
Type: CAZyme
Location: 26874 - 27650 (+)
Gene ID: Rep_946_c_26_30
Type: CAZyme
Location: 27702 - 28739 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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