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Cluster: Rep_946_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_946_c_19 Rep_946_c_19_84 91432 92289 + GH23
pfam Rep_946_c_19 Rep_946_c_19_85 92298 92861 - Imp-YgjV
STP Rep_946_c_19 Rep_946_c_19_86 92919 93494 - cNMP_binding
TC Rep_946_c_19 Rep_946_c_19_87 93737 95404 + 3.A.1.120.6
NULL(UNKNOWN) Rep_946_c_19 Rep_946_c_19_88 95498 95827 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_946_c_19 Rep_946_c_19_89 96092 97435 + 2.A.40.7.6
pfam Rep_946_c_19 Rep_946_c_19_90 97608 99023 - tRNA-synt_1c | Anticodon_2
TC Rep_946_c_19 Rep_946_c_19_91 99298 101400 + 1.B.52.2.1
Gene ID: Rep_946_c_19_84
Type: CAZyme
Location: 91432 - 92289 (+)
Gene ID: Rep_946_c_19_85
Type: pfam
Location: 92298 - 92861 (-)
Gene ID: Rep_946_c_19_86
Type: STP
Location: 92919 - 93494 (-)
Gene ID: Rep_946_c_19_87
Type: TC
Location: 93737 - 95404 (+)
Gene ID: Rep_946_c_19_88
Type:
Location: 95498 - 95827 (+)
Gene ID: Rep_946_c_19_89
Type: TC
Location: 96092 - 97435 (+)
Gene ID: Rep_946_c_19_90
Type: pfam
Location: 97608 - 99023 (-)
Gene ID: Rep_946_c_19_91
Type: TC
Location: 99298 - 101400 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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