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Cluster: Rep_946_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_946_c_16 Rep_946_c_16_7 7473 8624 - GH102
pfam Rep_946_c_16 Rep_946_c_16_8 8775 9026 + DUF1289
NULL(UNKNOWN) Rep_946_c_16 Rep_946_c_16_9 8992 9186 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_946_c_16 Rep_946_c_16_10 9135 10859 - 4.A.2.1.17
STP Rep_946_c_16 Rep_946_c_16_11 10856 11845 - PfkB
TC Rep_946_c_16 Rep_946_c_16_12 11845 12945 - 4.A.2.1.1
TF Rep_946_c_16 Rep_946_c_16_13 13245 14228 + LacI
TC Rep_946_c_16 Rep_946_c_16_14 14773 15966 + 2.A.42.1.1
Gene ID: Rep_946_c_16_7
Type: CAZyme
Location: 7473 - 8624 (-)
Gene ID: Rep_946_c_16_8
Type: pfam
Location: 8775 - 9026 (+)
Gene ID: Rep_946_c_16_9
Type:
Location: 8992 - 9186 (+)
Gene ID: Rep_946_c_16_10
Type: TC
Location: 9135 - 10859 (-)
Gene ID: Rep_946_c_16_11
Type: STP
Location: 10856 - 11845 (-)
Gene ID: Rep_946_c_16_12
Type: TC
Location: 11845 - 12945 (-)
Gene ID: Rep_946_c_16_13
Type: TF
Location: 13245 - 14228 (+)
Gene ID: Rep_946_c_16_14
Type: TC
Location: 14773 - 15966 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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